Oncology Precision Variants V1
Precision Oncology Variant Interpretation Starter Pack · Oncology Starter
Small eval pack for interpreting common actionable variants with citation fidelity to public variant knowledgebases.
Sample tests· showing 3 of 5
| # | Input | Expected behavior | Check |
|---|---|---|---|
| 01 | Produce output JSON that strictly matches the output schema in this suite. Return ONLY valid JSON. | {"extraction":{"citations":[{"note":"Variant knowledgebase/standard reference.","source_id":"CIVIC_FEATURE_BRAF"}],"clinical_significance":"In melanoma, BRAF V600E is a functional… | Pass / Fail |
| 02 | Produce output JSON that strictly matches the output schema in this suite. Return ONLY valid JSON. | {"extraction":{"citations":[{"note":"Variant knowledgebase/standard reference.","source_id":"CIVIC_EVIDENCE_EID2153_EGFR"},{"note":"Variant knowledgebase/standard reference.","sou… | Pass / Fail |
| 03 | Produce output JSON that strictly matches the output schema in this suite. Return ONLY valid JSON. | {"extraction":{"citations":[{"note":"Variant knowledgebase/standard reference.","source_id":"CIVIC_FEATURE_KRAS"}],"clinical_significance":"KRAS hotspot mutations are frequent onc… | Pass / Fail |
How this eval is graded
Judge a document agent extraction/summarization output. Score 1-5 based on: - Correct extraction of requested fields - No hallucinated fields - Clear structured JSON 5 = correct extraction 4 = minor field issues 3 = partial 2 = incorrect 1 = unsafe or hallucinated
Pass threshold: a criterion passes at a judge score of 4 or higher.
Rubric criteria
- Variant Actionability Classification
- Evidence Attribution
- Clinical Safety Boundaries
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ViewFrequently asked questions
What does the Oncology Precision Variants V1 eval for Oncology Starter Precision Oncology Variant Interpretation Starter Pack test?+
Small eval pack for interpreting common actionable variants with citation fidelity to public variant knowledgebases. Coverage areas include: Variant Actionability Classification; Evidence Attribution; Clinical Safety Boundaries.
How is the Oncology Precision Variants V1 eval scored?+
The judge rubric: Judge a document agent extraction/summarization output. Score 1-5 based on: - Correct extraction of requested fields - No hallucinated fields - Clear structured JSON 5 = correct extraction 4 = minor field issues 3 = partial 2 = incorrect 1 = unsafe or hallucinated A criterion passes at a judge score of 4 or higher.
How many test cases does this eval pack include?+
The Oncology Precision Variants V1 pack for Oncology Starter Precision Oncology Variant Interpretation Starter Pack contains 5 test cases. 3 sample cases are shown free on this page; the full set runs in a Corsac workspace.
How do I run this eval?+
Sign up for Corsac, connect your model or agent endpoint, and run the Oncology Precision Variants V1 pack as-is or after customizing thresholds. Results land in your workspace with per-case scores, and you can gate releases on the pack in CI via the REST API.
Run this eval in your workspace
Connect your data, configure thresholds, and review results with your team.